PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004496613.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 213aa    MW: 23160.5 Da    PI: 4.7286
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004496613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.54.4e-153885355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+G r ++ +g+Wv+eIr+p++   +kr++lg++ t e+Aa+a++ a+++l+g
  XP_004496613.1 38 YRGTR-CR-SGKWVSEIREPRK---TKRIWLGTYPTSEMAAAAYDVAALALKG 85
                    55555.44.588*******843...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.7E-103585IPR001471AP2/ERF domain
SMARTSM003806.2E-263799IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-243794IPR001471AP2/ERF domain
PROSITE profilePS5103219.9543793IPR001471AP2/ERF domain
CDDcd000185.21E-153795No hitNo description
SuperFamilySSF541716.54E-183895IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MDGKPYPPPA VLPCIEVSSN SSPTPSASAS SSSPSVRYRG TRCRSGKWVS EIREPRKTKR  60
IWLGTYPTSE MAAAAYDVAA LALKGPDTFL NFPNSILSYP IPASMSPTDI RAAAEAAAQA  120
RIVNVIRSSQ SQQEEKEKEN PSCFEGSNSD SGHQQQYIDE DELLNMPNLL DDMARGMQVS  180
PPRITSFSNY SDHDNSPSNS DSGGGDNLWS YTF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004496613.11e-157PREDICTED: ethylene-responsive transcription factor ERF027-like
SwissprotQ9FJ905e-44ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLG7IBZ91e-66G7IBZ9_MEDTR; Ethylene-responsive transcription factor ERF026
STRINGGLYMA20G29440.12e-62(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.15e-31ERF family protein